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DNA Kb ladder

公司名称: New England Biolabs
产品编号: N3232L
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Mapping mRNA-18S rRNA Contacts Within Translation Initation Complex by Means of Reverse Transcriptase Termination Sites and RNAseq
Author:
Date:
2020-08-20
[Abstract]  The nucleotides involved in RNA-RNA interaction can be tagged by chemical- or UV-induced crosslinking, and further identified by classical or modern high throughput techniques. The contacts of mRNA with 18S rRNA that occur along the mRNA channel of 40S subunit have been mapped by site-specific UV crosslinking followed by reverse transcriptase termination sites (RTTS) using radioactive or fluorescent oligonucleotides. However, the sensitivity of this technique is restricted to the detection of those fragments that resulted from the most frequent crosslinkings. Here, we combined RTTS with ... [摘要]  [摘要 ] 可以通过化学或紫外线诱导的交联来标记参与RNA-RNA相互作用的核苷酸,并通过经典或现代的高通量技术对其进行进一步鉴定。沿着40S亚基的mRNA通道发生的18S rRNA与mRNA的接触已通过位点特异性UV交联进行了定位,随后使用放射性或荧光寡核苷酸进行了逆转录酶终止位点(RTTS)。但是,该技术的敏感性仅限于检测由最频繁的交联产生的那些片段。在这里,我们将RTTS与RNAseq结合使用,以更深的分辨率绘制了mRNA-18S rRNA接触图。尽管旨在检测mRNA与18S rRNA的ES6S区域的相互作用,但该技术也可以用于绘制mRNA与其他非编码RNA分子的相互作用(在转录,剪接或RNA介导的转录后调控过程中(例如,snRNA,microRNA和lncRNA)。

[背景 ] 是与非编码RNA的mRNA的相互作用volved mRNA中的生命周期的每个步骤,从它的生物合成和处理进入细胞核至细胞质中的翻译和最终降解。这些相互作用可以在大分子机器核糖体和剪接体,以及在较小的复合物如RISC或者发生(RNA诱导的沉默复合物)或lncRNA介导的基因表达调节期间(皮萨列夫等人,2008; Engreitz 。等人,2014 Sharma ...

In vitro Assays for Eukaryotic Leading/Lagging Strand DNA Replication
Author:
Date:
2017-09-20
[Abstract]  The eukaryotic replisome is a multiprotein complex that duplicates DNA. The replisome is sculpted to couple continuous leading strand synthesis with discontinuous lagging strand synthesis, primarily carried out by DNA polymerases ε and δ, respectively, along with helicases, polymerase α-primase, DNA sliding clamps, clamp loaders and many other proteins. We have previously established the mechanisms by which the polymerases ε and δ are targeted to their ‘correct’ strands, as well as quality control mechanisms that evict polymerases when they associate with an ‘incorrect’ strand. Here, we ... [摘要]  真核生物复制品是重复DNA的多蛋白复合物。 复制品被雕刻成连续的前导链合成与不连续的滞后链合成,主要通过DNA聚合酶ε和δ以及解旋酶,聚合酶α-引发酶,DNA滑动夹,夹带载体和许多其它蛋白质进行。 我们以前已经建立了聚合酶ε和δ靶向其“正确”链的机制,以及在与“不正确”链相关联时驱赶聚合酶的质量控制机制。 在这里,我们提供了使用纯蛋白质在体外差异测定前导和滞后链复制的实用指南。
Using pure proteins from Saccharomyces cerevisiae, our lab was the first to reconstitute a functional eukaryotic DNA replisome, a ~2 MDa complex that includes the 11-subunit CMG helicase (complex of Cdc45, Mcm2-7, GINS heterotetramer), the 4-subunit DNA polymerase (Pol) ε, the 4-subunit Pol α-primase, the PCNA (Proliferating Cell Nuclear Antigen) clamp homotrimer ring shaped processivity factor that ...

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